Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891083.1_cds_XP_016445785.1_40711
CDS Infomation

[gene=LOC107770971] [db_xref=GeneID:107770971] [protein=1-aminocyclopropane-1-carboxylate synthase-like] [protein_id=XP_016445785.1] [location=join(16318..16488,16807..16938,17066..17226,17952..18939)] [gbkey=CDS]
Sequence

ATGGGGTTCATTTCAAGCATCGACAATGAGCTGCTTTCTAAGGTAGCAACCAATAATGGG
CATGGTGAAAACTCAGCCTATTTTGATGGTTGGAAGGCCTATGAAATTGATCCTTTTCAT
CCAACACAAAATTCTGATGGGGTTATTCAGATGGGTCTCGCAGAAAATCAGCTTTGCTTT
GATTTAATACAAGAATGGGTGGTGAAGAATCCAAAAGCCTCCATTTGCACAGCTGAAGGG
TCTCAAGATTTCAAGGATATTGCAATTTATCAAGATTATCATGGTTTGCCAGAATTCCGA
AGTGCTGTTGCAAGGTTCATGGGAAAAGTGAGAGGAGACAGAATAACATTTGAGCCAGAA
CGCATAGTTATGAGTGGAGGGGCTACTGGAGCTCATGAATTACTGGCCTTCTGCTTGGCT
GATCCTGGAGAGGCATTTCTGGTTCCTACACCCTATTATCCAGGATTTGACAGAGATTTG
AGGTGGCGAACTGGGGTGCAACTTTTTCCTGTTGTTTGTGAAAGCTCTAACAATTTCAAG
GTCACAAAAGAAGCCTTAGAAGCTGCATACCAGAAAGCTCAAGAATCCAATATTACAGTA
AAGGGCTTGCTTTTAAACAATCCATCTAATCCACTGGGCACAATCTTAGACAGGGAAACA
TTAAAAGACACAGTAAGGTTCATTAACGAGAAAAACATCCACCTCGTATGTGACGAAATA
TACGCTGCCACAATCTTTAACAAGCCCGATTTCATCAGCATATCCGAAGTAATAATGGAG
GAAGATGTTGAATGTGACCGCGATTTAATACACATTGTTTATAGCCTGTCAAAGGATTTG
GGATTTCCTGGATTCAGAGTCGGGATTATTTACTCATACAACGATGTTGTAACAAATTGT
GCCCGAAAAATGTCAAGTTTCGGGTTAGTTTCAACACAAACTCAATTCTTGATTTCAAAC
ATGCTATCGGACGAAAATTTCGTTACGAAATTCATTGGTGAGAGTAGTGAAAGGTTACAA
AAAAGACATGGCATGTTTACTAGGGGACTTGCACAAGTGGGGATTAACACATTGAAGAGT
AACGCTGGCTTGTTTATATGGATGGATTTGAGAAGGCTTCTTAAGGAGCTTACATTCGAA
GCTGAGCTCGAACTTTGGCGAATAATTATTAATGAAGTTAAACTTAATGTTTCGCCCGGT
TGTTCTTTTCATTGTTCAGAGCCTGGTTGGTTTAGAGTTTGTTTTGCAAATATGGATGAT
GAAACTATGAGGATTGCCTTAAGAAGGATTAACAACTTTGTGATTCAACGTAAAGGGATT
GAAGGAGGAGTCAAGAAATTACAATGTCGGAGGAGTAAATTGGAGATTAGTTTATCGTTC
AGAAAATTGGATGATTTTATGAACTCTCCTCACTCTCCAATGTCTTCGCCTTTGGTCCAG
GCTAGGACATAA

Peptide Sequence

PEP ID

XP_016445785.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Nicotiana tabacum]
Sequence

MGFISSIDNELLSKVATNNGHGENSAYFDGWKAYEIDPFHPTQNSDGVIQMGLAENQLCF
DLIQEWVVKNPKASICTAEGSQDFKDIAIYQDYHGLPEFRSAVARFMGKVRGDRITFEPE
RIVMSGGATGAHELLAFCLADPGEAFLVPTPYYPGFDRDLRWRTGVQLFPVVCESSNNFK
VTKEALEAAYQKAQESNITVKGLLLNNPSNPLGTILDRETLKDTVRFINEKNIHLVCDEI
YAATIFNKPDFISISEVIMEEDVECDRDLIHIVYSLSKDLGFPGFRVGIIYSYNDVVTNC
ARKMSSFGLVSTQTQFLISNMLSDENFVTKFIGESSERLQKRHGMFTRGLAQVGINTLKS
NAGLFIWMDLRRLLKELTFEAELELWRIIINEVKLNVSPGCSFHCSEPGWFRVCFANMDD
ETMRIALRRINNFVIQRKGIEGGVKKLQCRRSKLEISLSFRKLDDFMNSPHSPMSSPLVQ
ART

Transcript Sequence

Gene sequence data has not been registered.